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http://hdl.handle.net/10609/73207
Title: Desarrollo de una aplicación web para obtener información sobre datos de genomas y transcriptomas
Author: Barreñada Taleb, Odei
Director: Ylla Bou, Guillem
Tutor: Ventura Royo, Carles  
Merino Arranz, David
Others: Universitat Oberta de Catalunya
Keywords: web applications
RNA-seq
blattella germanica
Issue Date: Jan-2018
Publisher: Universitat Oberta de Catalunya
Abstract: This project arises from the need to allow an easy access and visualization of transcriptomic data of the laboratory of Xavier Bellés from the institute of evolutionary biology (IBE). These data are, mainly, results of analysis of gene expression by RNA-seq of the insect Blattela germanica obtained at different stages of the development of metamorphosis. The final product of this project is the creation of a web application that allows to search, navigate and visualize transcriptomic data hosted by this laboratory. The application was created using R and the Shiny package. This combination of tools allows the creation of interactive interfaces with all the potential of R. The application is designed in different tabs that each can perform a different function. There are tabs to query expression values, to create bar graphs, search for genes according to their sequence using BLAST software, analyze co-expression data between genes or consult the orthologous gene dictionary with Drosophila melanogaster.
Language: Spanish
URI: http://hdl.handle.net/10609/73207
Appears in Collections:Bachelor thesis, research projects, etc.

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