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Title: | Análisis de herramientas bioinformáticas para la detección de CNVs en muestras de pacientes mediante secuenciación de exoma completo (WES) |
Author: | Sevilla Romero, Enrique |
Tutor: | Maynou Fernández, Joan |
Others: | Ventura, Carles |
Abstract: | In recent years, the next generation sequencing (NGS) has become the standard tool for the study of genetic variability. It has shown to have a huge potential to detect variations at the level of a single nucleotide (SNPs), insertions or deletions of 3 -4 nucleotides, as well as structural variations; balanced (inversions and translocations) and unbalanced (deletions and duplications). The sequencing of whole-exome sequencing (WES) has become the most suitable sequencing for the analysis of CNVs because we obtain a very good coverage of the regions of analysis at a lower cost. In this work, we have focused on the detection and analysis of these structural variations at the number of copies (CNVs) in samples sequenced by WES. Currently, there are two approaches for the detection of CNVs from WES somatic line data; one of them is the depth of coverage (COD) and the other is the Paired-End Mapper (PEM). |
Keywords: | NGS CNV algorithms pipeline |
Document type: | info:eu-repo/semantics/masterThesis |
Issue Date: | Jan-2019 |
Publication license: | http://creativecommons.org/licenses/by-nc-nd/3.0/es/ |
Appears in Collections: | Trabajos finales de carrera, trabajos de investigación, etc. |
Files in This Item:
File | Description | Size | Format | |
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esevillarTFM0119memoria.pdf | Memoria del TFM | 2,76 MB | Adobe PDF | View/Open |
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